Blue Collar Bioinformatics Note new posts have moved to httpbcb.io Please look there for the latest updates and comments
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Python Tools for Computational Molecular Biology. Edit this page on GitHub. See also our News feed. Biopython is a set of freely available tools for biological computation written in Python. By an international team of developers. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. The source code is made available under the Biopython License.
The musings and ravings of a computational biologist about science, computers, music and, you know, stuff. Machine learning people, your comments are welcome. How much do cows offset wind energy savings? On September 5th, 2016. For every 1kWh energy produced.
Thursday, May 24, 2012. After learning that Stacy likely has a compound heterozygote mutation causing CMT4, I found out that SH3TC2 is a known CMT4 causal gene causing CMT4C. I decided to investigate what we know about SH3TC2 and CMT4 in general. Friday, May 18, 2012. Who has an awesome blog.
Thursday, February 2, 2017. What is the UCSF500? Is more than genome sequencing, but molecular profiling is an essential part of it. Recognizing this, in 2014 UC San Francisco launched the Genomic Medicine Initiative to bring high-throughput DNA and RNA sequencing techniques into routine clinical care. The first product of this effort is the UCSF500, a targeted cancer genome sequencing service that is now available to patients at the UCSF Medical Center.
Explaining and interpreting predictive models. A couple of years ago, I participated in a workshop on academic data science at SICS. It gives a useful overview of how to think about interpretability in machine learning. Ideas on interpreting machine learning.
Extracting useful information from large genomic datasets. The MacArthur lab uses cutting-edge genomic technologies at massive scale to understand the impact of human genetic variation, and to provide answers to families affected by rare genetic diseases. We lead an international consortium that has assembled ExAC. Is an intuitive online portal for exploring exome and whole-genome sequencing data from rare disease families.
Through our fiscal sponsor, Software in the Public Interest, Inc. You can donate to the OBF, including online by credit card. See also our news page.
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The site had the following in the homepage, "Note new posts have moved to http bcb." I noticed that the web site stated "io Please look there for the latest updates and comments." They also stated " Validating multiple cancer variant callers and prioritization in tumor-only samples. The post discusses work validating multiple cancer variant callers in bcbio-nextgen. Using a synthetic reference call set from the ICGC-TCGA DREAM challenge. Weve previously validated germline variant calling methods. Publicly available whole genome truth sets like the NA12878 Genome in a Bottle reference materials."ANALYZE MORE BUSINESSES
Want to be a HS Science Teacher? San Joaquin Kit Fox. The San Joaquin kit fox is one of the most endangered animals in California. The kit fox is the size of a house cat, with big ears, a long bushy tail and furry toes that help to keep it cool in the hot and dry Central Valley environment. BC Biology Department Mission Statement.
Cri Du Chat - Cry of the Cat. Cri Du Chat - Cry of the Cat. Cri Du Chat Syndrome happens when genetic information on chromosome 5 is missing.
Tuesday, March 13, 2018. L ar ge raft of scoters near to. Bluffs Drive in the Eaglecrest Area. They viewed the bird for an hour by scope. They were unable to photograph the bird due to distance. The bird was relocated by Guy Monty et al. At the end of Whitmee Rd and i.
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Sunday, February 23, 2014. Tuesday, December 14, 2010.