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False Discoveries FDR-calculations in proteomics Some common misstakes on FDR-calculations I noted while reviewing papers in MS-based proteomics

Here I have listed some of the concepts leading to the most common misconceptions about false discovery rates FDRs, and FDR-calculations that I have encountered while reviewing and reading articles on mass spectrometry-based proteomics. The links will lead you to typical illustrations of such miss conceptions. An FDR is not a property of an identification,

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False Discoveries FDR-calculations in proteomics Some common misstakes on FDR-calculations I noted while reviewing papers in MS-based proteomics

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Here I have listed some of the concepts leading to the most common misconceptions about false discovery rates FDRs, and FDR-calculations that I have encountered while reviewing and reading articles on mass spectrometry-based proteomics. The links will lead you to typical illustrations of such miss conceptions. An FDR is not a property of an identification,

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The site had the following in the homepage, "Some common misstakes on FDR-calculations I noted while reviewing papers in MS-based proteomics." I noticed that the web site stated " Typical misconceptions when not differentiating between FDRs of different lists." They also stated " An FDR is not a property of an identification, its a property of a set. False discovery rates are not the same thing as target-decoy analysis. The FDR of a set of proteins or peptides is different than the FDR of the set of peptide-spectrum matches they were derived from."

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