For more information on the position and how to apply, see the ad on the Harvard jobs site. Snoscan and squid in the 21st century.

GSOC 2010 - Adding RNA Support to Jalview. Google Summer of Code 2010. Source Code Hosted by Google. This blog is about my work for the Google Summer of Code 2010. I am working with Jim Procter and Albert Vilella as my mentors to add RNA support to the multiple sequence alignment editor Jalview. Random colors for covariation color scheme. MAFFT - multiple sequence alignment. Wednesday, August 18, 2010.

This site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser. TreeFam - database of animal gene trees. TreeFam is a database composed of phylogenetic trees inferred from animal genomes.

Catching up with Rutger at the EBI and ISMB. Gthy trip to England and Ireland, in which I had the chance to catch up with a member of the lab, Rutger Evans, who has been working on a summer project at the EBI. Under the guidance of one of my favorite collaborators, Rob Finn. Student receives fellowship for summer 2016. RNAcentral now uses nhmmer for searches.

A science blog, by a scientist, mostly about computational biology and plant science, but a little rambly in places. Sunday, 27 July 2014. In which I talk about points for wins, losses, and draws in rugby league, and how framing of quantitative data is important. Friday, 11 July 2014. The Baserate Fallacy, revisited. Then I get entangled in a topic outwith my expertise. Sunday, 10 November 2013. ANI are you okay? Are you okay ANI? In which I fi.

On the importance of controls, even when the tools are computational. NB this content is reposted from an article I wrote for the NZSBMB. Negative Controls are a backbone of research, and an important component of the definition of P-values that are frequently used to report the significance of findings. Monday, 13 April 2015.